Author

Rahul P. Salunke

King Abdullah University of Science and TechnologyORCID 0000-0001-7688-1164Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Genomics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:bulk RNA-seq· 3 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1

Frequent Co-Authors

Amit Kumar SubudhiiD· 3 shared Arnab PainiD· 3 shared Rohit SatyamiD· 3 shared Abdullah Fuaad Kadamany· 2 shared Ashraf M. DadaiD· 2 shared David J. P. FergusoniD· 2 shared Sara MfarrejiD· 2 shared Alberto MailloiD· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 35 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersMicrobiology

Amit Kumar SubudhiORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

MicrobiologybioRxivPreprintJul 12, 2026

Malaria parasites coordinate host cell remodeling through the AP2-HCR DNA-binding protein

Amit Kumar Subudhi, Dhiviya Vedagiri, Sara Mfarrej…·Arnab Pain

This study identifies PfAP2-HCR as a critical transcription factor regulating host cell remodeling in Plasmodium falciparum, essential for parasite survival and transmission.

DOI 10.64898/2026.06.23.733580

humanbulk RNA-seq

𝕏 PostBluesky

BioinformaticsbioRxivPreprintJul 30, 2025

plasmoRUtils: A one-stop R Package for Plasmodium and other Apicomplexan parasite-related Bioinformatics analysis

Rohit Satyam, Alberto Maillo, Amit Kumar Subudhi…·Arnab Pain

plasmoRUtils streamlines bioinformatics analysis for Apicomplexan parasites by integrating data retrieval, harmonization, and analysis tools within R.

DOI 10.1101/2025.07.30.667718

proteomicsDNA methylation

𝕏 PostBluesky

GenomicsbioRxivPreprintMay 23, 2023

PfAP2-MRP DNA-binding protein is a master regulator of parasite pathogenesis during malaria parasite blood stages

Amit Kumar Subudhi, Judith L. Green, Rohit Satyam…·Arnab Pain

This study identifies PfAP2-MRP as a master regulator controlling parasite growth, chromatin structure, and var gene expression during malaria parasite blood stages.

6 citations

humanbulk RNA-seq

𝕏 PostBluesky