BioinformaticsCell SystemsPeer-reviewed
Automated single-cell omics end-to-end framework with data-driven batch inference
Yuan Wang, William Thistlethwaite, Alicja Tadych…·Olga G. Troyanskaya
SPEEDI automates single-cell multi-omics analysis by integrating data, inferring batches, and labeling cell types without user input, improving reproducibility and accessibility.