Author

Nan Li

University of California San DiegoORCID 0000-0001-7826-4688Unclaimed ORCID profile · follow to get notified of new preprints

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Nan Li10 papers · Westlake University

Biology Disciplines

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Bioinformatics· 2 Neuroscience· 1

Signature Assays, Organisms & Methods

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Research Focus:cell-cell communication· 2 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1

Frequent Co-Authors

Bingrui ZhaoiD· 1 shared Dongdong ZhangiD· 1 shared Guanglei XieiD· 1 shared Jianxiong TangiD· 1 shared Jiaqi TuiD· 1 shared Jie-Min JiaiD· 1 shared Kai ZhangiD· 1 shared Kai Zhang· 1 shared

Activity by Year

2016-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 22 mutual co-author links

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1 shared paperNeuroscience

Bingrui ZhaoORCID

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3 papers

Recent·Most cited

NeuroscienceeLifePeer-reviewedJul 16, 2025

The myeloid cell-driven transdifferentiation of endothelial cells into pericytes promotes the restoration of BBB function and brain self-repair after stroke

Tingbo Li, Ling Yang, Jiaqi Tu…·Jie-Min Jia

This study shows that myeloid cell-driven transdifferentiation of endothelial cells into pericytes helps restore BBB function and brain repair after stroke.

3 citations

mousebulk RNA-seq

𝕏 PostBluesky

Bioinformaticsnpj Genomic MedicinePeer-reviewedFeb 1, 2019

Integrative analysis with expanded DNA methylation data reveals common key regulators and pathways in cancers

Shicai Fan, Jianxiong Tang, Nan Li…·Wei Ting Wang

The paper expands DNA methylation data from TCGA using EAGLING, identifies triple-evidenced genes across 13 cancers, and reveals enriched pathways with potential therapeutic value.

48 citations

humanDNA methylation

𝕏 PostBluesky

BioinformaticsbioRxivPreprintJan 7, 2016

Systematic identification of cooperation between DNA binding proteins in 3D space

Kai Zhang, Nan Li, Wei Wang

The paper introduces a method to identify both cis- and trans-cooperation between DNA-binding proteins using ChIP-seq and Hi-C data, revealing new insights into 3D chromosomal interactions.

DOI 10.1101/036145

𝕏 PostBluesky