Author

Brett E Pickett

Brigham Young UniversityORCID 0000-0001-7930-8160Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Microbiology· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Organism:human· 2 Research Focus:cell type annotation· 1 Assay:scRNA-seq· 1 Organism:zebrafish· 1

Frequent Co-Authors

Allison G. PickensiD· 1 shared Andrea GuarracinoiD· 1 shared Andreas J GruberiD· 1 shared Annalie MartiniD· 1 shared Anne Babbitt· 1 shared Arminda SuliiD· 1 shared Avantika LaliD· 1 shared Bradford K. BergesiD· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 13 mutual co-author links

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1 shared paperNeuroscience

Allison G. PickensORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

MicrobiologybioRxivPreprintFeb 18, 2026

Host gene expression changes induced by an HIV-1 mutant associated with delayed AIDS progression reveal potential mechanisms

Sidney T. Sithole, Joshua S. Ramsey, Macey C. Call…·Bradford K. Berges

The paper identifies 289 differentially expressed genes in HIV-1 R77Q-infected cells compared to wild-type, revealing an apoptotic signature and failure to upregulate anti-apoptotic genes like bcl-2.

DOI 10.64898/2026.02.18.706531

humanbulk RNA-seq

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NeuroscienceFrontiers in Molecular NeurosciencePeer-reviewedFeb 10, 2022

Single-Cell RNA Sequencing Characterizes the Molecular Heterogeneity of the Larval Zebrafish Optic Tectum

Annalie Martin, Anne Babbitt, Allison G. Pickens…·Arminda Suli

This study uses scRNA-seq to identify 25 transcriptionally distinct cell populations in the larval zebrafish optic tectum, including neuronal and non-neuronal types.

22 citations

zebrafishscRNA-seq

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BioinformaticsCommunications BiologyPeer-reviewedMay 17, 2021

Genome-wide bioinformatic analyses predict key host and viral factors in SARS-CoV-2 pathogenesis

Mariana Galvão Ferrarini, Avantika Lal, Rita Rebollo…·Vanessa Aguiar‐Pulido

The paper uses bioinformatic analyses of RNA sequencing data to identify host and viral factors involved in SARS-CoV-2 pathogenesis, including differentially expressed genes and viral sequence variants linked to disease severity.

48 citations

humanbulk RNA-seq

𝕏 PostBluesky