Author

Anderson Pereira Soares

Universidade de São PauloORCID 0000-0001-8066-818XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Microbiology· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:drug response / drug discovery· 2 Assay:proteomics· 2 Approach:statistical model· 2 Organism:virus· 2 Research Focus:benchmarking· 1 Approach:deep learning· 1 Approach:machine learning (classical)· 1 Approach:mechanistic / dynamical model· 1

Frequent Co-Authors

Caio César de Melo FreireiD· 3 shared Daniel Ferreira de Lima NetoiD· 3 shared Miklos Maximiliano BajayiD· 2 shared André Berndt PenteadoiD· 1 shared Ayda Susana Ortiz Baez· 1 shared Carlos Francisco Sampaio Bonafé· 1 shared Igor Nicodemo de Oliveira· 1 shared Juan Philippe TeixeiraiD· 1 shared

Activity by Year

2018-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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3 shared papersMicrobiology

Caio César de Melo FreireORCID

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3 papers

Recent·Most cited

MicrobiologyFrontiers in Cellular and Infection MicrobiologyPeer-reviewedApr 30, 2026

Integrative Proteome-Wide Structural Analysis and High-Throughput Docking Identify Broad-Spectrum Antiviral Scaffolds Against Zika, Yellow Fever, West Nile, Saint Louis Encephalitis, and Usutu Viruses

Anderson Pereira Soares, André Berndt Penteado, Juan Phillippe Teixeira…·Daniel Ferreira de Lima Neto

The paper identifies broad-spectrum antiviral scaffolds against multiple flaviviruses using integrative proteome-wide virtual screening and docking.

DOI 10.3389/fcimb.2026.1723132

proteomicsdeep learning

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BioinformaticsbioRxivPreprintApr 29, 2026

An Open-Source Reproducible Workflow for Pocket-Oriented Virtual Screening and ADME-Integrated Chemoinformatics: A Multi-Target Flavivirus Case Study

Juan Philippe Teixeira, Miklos Maximiliano Bajay, Caio César de Melo Freire…·Daniel Ferreira de Lima Neto

The paper presents an open-source workflow for multi-target compound prioritization in drug discovery, integrating docking, ADME descriptors, and chemoinformatics for flaviviruses.

DOI 10.64898/2026.04.28.721199

virusproteomics

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MicrobiologybioRxivPreprintMay 7, 2018

Molecular dynamics suggests antiviral compounds active against Dengue Virus show similar binding patterns to Zika Virus proteins

Daniel Ferreira de Lima Neto, Anderson Pereira Soares, Shahab Zaki Pour…·Carlos Francisco Sampaio Bonafé

The paper uses molecular dynamics to show that antiviral compounds active against Dengue virus bind to similar sites on Zika virus proteins NS5, NS3, and Envelope.

DOI 10.1101/309351

virusstructural biology

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