Author

Louise Deconinck

Ghent UniversityORCID 0000-0001-8100-6823Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Assay:bulk RNA-seq· 1 Approach:experimental assay· 1 Assay:scRNA-seq· 1 Approach:simulation· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Robrecht CannoodtiD· 2 shared Yvan SaeysiD· 2 shared Brian Schilder· 1 shared Chananchida Sang-aramiD· 1 shared Danila BredikhiniD· 1 shared Isaac VirshupiD· 1 shared Luke ZappiaiD· 1 shared Martin T. MorganiD· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersBioinformatics

Robrecht CannoodtORCID

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2 papers

Recent·Most cited

BioinformaticsBioinformaticsPeer-reviewedMay 5, 2026

anndataR improves interoperability between R and Python in single-cell transcriptomics

Louise Deconinck, Luke Zappia, Robrecht Cannoodt…·Yvan Saeys

anndataR enables interoperability between R and Python by allowing native reading and writing of H5AD files in R, with compatibility testing and conversion to R single-cell objects.

5 citationstop 5%

bulk RNA-seqexperimental assay

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BioinformaticsNature CommunicationsPeer-reviewedJun 24, 2021

dyngen: a multi-modal simulator for spearheading new single-cell omics analyses

Robrecht Cannoodt, Wouter Saelens, Louise Deconinck, Yvan Saeys

dyngen is a multi-modal simulation tool that enables the development and testing of new computational methods for single-cell omics analyses.

124 citationstop 1%

scRNA-seqsimulation

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