Author

Shaoting Li

Chinese Academy of Medical Sciences & Peking Union Medical CollegeORCID 0000-0001-8305-1492Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Organism:bacteria (other)· 1 Research Focus:database / resource· 1 Assay:metabolomics· 1 Organism:mouse· 1 Research Focus:phylogenetics / evolution· 1 Assay:proteomics· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Ji ZengiD· 1 shared Jianying Han· 1 shared Jinyu ZhouiD· 1 shared Lifeng YangiD· 1 shared Lin WangiD· 1 shared Pan XuiD· 1 shared Shaokang ZhangiD· 1 shared Weidong Zhuang· 1 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 14 mutual co-author links

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1 shared paperGenomics

Ji ZengORCID

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3 papers

Recent·Most cited

GenomicsMicrobiology SpectrumPeer-reviewedJun 15, 2026

Reliable delineation of Clostridioides difficile and related members of the family Peptostreptococcaceae using phylogenomics and spore coat protein-specific molecular markers

Jianying Han, Yannan Li, Yuxi Xu…·Ji Zeng

This study improves classification of Clostridioides difficile and related bacteria using phylogenomics and spore coat protein markers, leading to taxonomic revisions.

DOI 10.1128/spectrum.04185-25

proteomicsstatistical model

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BioinformaticsAnalytical ChemistryPeer-reviewedJul 15, 2025

SMART: an approach for accurate formula assignment in spatially-resolved metabolomics

Yinghao Cao, Shaoting Li, Zhaoyi Liu…·Lin Wang

SMART improves formula assignment in spatial metabolomics by using a database and regression model, achieving 92.4% accuracy in mouse embryo imaging.

5 citations

mousemetabolomics

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GenomicsApplied and Environmental MicrobiologyPeer-reviewedJul 16, 2020

Impact of library preparation-induced low GC sequencing bias on Salmonella serotype prediction using SeqSero2

Shaoting Li, Shaokang Zhang, Xiangyu Deng

The paper identifies that Nextera XT library preparation introduces low GC sequencing bias, affecting O antigen prediction by SeqSero2 in Salmonella genomes.

11 citations

bacteria (other)whole-genome sequencing

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