Author

Benjamin J. Ainscough

Washington University in St. LouisORCID 0000-0001-8340-514XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 2 Genetics· 1

Signature Assays, Organisms & Methods

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Assay:whole-exome sequencing· 2 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Organism:human· 1 Approach:statistical model· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Katie Marie CampbelliD· 3 shared Kilannin KrysiakiD· 3 shared Malachi GriffithiD· 3 shared Nicholas C. SpiesiD· 3 shared Obi L. GriffithiD· 3 shared Zachary L. SkidmoreiD· 3 shared Alex Handler WagneriD· 2 shared Arpad M. DanosiD· 2 shared

Activity by Year

2018-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersGenomics

Katie Marie CampbellORCID

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3 papers

Recent·Most cited

GenomicsbioRxivPreprintJun 13, 2021

Evolution of the open-access CIViC knowledgebase is driven by the needsof the cancer variant interpretation community

Kilannin Krysiak, Arpad M. Danos, Susanna Kiwala…·Malachi Griffith

The paper describes the evolution of the CIViC knowledgebase to meet the needs of the cancer variant interpretation community by expanding its functionality and data types.

DOI 10.1101/2021.06.13.448171

database / resource

𝕏 PostBluesky

GeneticsGenetics in MedicinePeer-reviewedOct 3, 2018

Standard operating procedure for somatic variant refinement of tumor sequencing data

Erica Kay Barnell, Peter Ronning, Katie Marie Campbell…·Obi L. Griffith

This paper establishes a standard operating procedure for manual refinement of somatic variants in tumor sequencing data to improve consistency and reproducibility.

94 citationstop 5%

whole-exome sequencingwhole-genome sequencing

𝕏 PostBluesky

GenomicsNature CommunicationsPeer-reviewedAug 22, 2018

The prognostic effects of somatic mutations in ER-positive breast cancer

Obi L. Griffith, Nicholas C. Spies, Meenakshi Anurag…·Matthew J. Ellis

The paper identifies somatic mutations with prognostic effects in ER+ breast cancer using genomic data from multiple cohorts.

130 citationstop 5%

humanwhole-exome sequencing

𝕏 PostBluesky