Denise Slenter

PlantMetWiki integrates plant metabolic pathway data across species to enable cross-species analysis and hypothesis generation.

The paper describes a standardized approach to represent Inherited Metabolic Disorders in WikiPathways, highlights limitations in machine-readable disease information, and introduces methods for data curation and analysis using SPARQL queries.

This paper presents a framework integrating metabolic pathway knowledge with patient data to aid in diagnosing inherited metabolic disorders through visualization of biomarker interactions.

The paper describes the development of a computational knowledge repository, the COVID-19 Disease Map, which curates SARS-CoV-2 virus-host interaction mechanisms and provides tools for their analysis and application.

The paper describes Wikidata as a FAIR knowledge graph for life sciences, showcasing its breadth, tools for integration, and use cases in biomedical analysis.