Antony Rose

Human Developmental Cell Atlas integrates ~4.6 million cells/nuclei from 4-22 post-conception weeks into 454 refined cell types and maps 114 spatial niches across 6PCW whole-embryo sections.

TarDis disentangles multiple covariates in single-cell genomics, improving data integration and out-of-distribution predictions by generating structured latent representations.

This paper introduces scTRAM, a framework to quantitatively evaluate single-cell trajectory representations, revealing model-specific trade-offs and structural biases in embeddings.

CellDISECT improves cell type discovery and counterfactual predictions by disentangling covariates and using synthetic data for training.

This study creates a prenatal human skin cell atlas, revealing immune cells' role in skin development and showing their impact on vascular and hair follicle formation.

The paper maps the multi-organ functions of the human yolk sac during early development, revealing its roles in hematopoiesis, nutrition, and oxygen regulation.