Author

Ella Anttila

University of HelsinkiORCID 0000-0001-8526-4934Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Assay:imaging· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Approach:deep learning· 1 Approach:experimental assay· 1 Organism:human· 1

Frequent Co-Authors

Ada JunqueraiD· 2 shared Anni VirtaneniD· 2 shared Anniina FärkkiläiD· 2 shared Fernando Pérez‐VillatoroiD· 2 shared Julia CasadoiD· 2 shared Ziqi KangiD· 2 shared Aleksandra ShabanovaiD· 1 shared Angela Szabo· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 42 mutual co-author links

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2 shared papersCancer Biology

Ada JunqueraORCID

Mutual co-authors in cluster

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2 papers

Recent·Most cited

Cancer BiologyCancer DiscoveryPeer-reviewedFeb 9, 2026

✦ In-depth digest

Single-cell spatial atlas of high-grade serous ovarian cancer unveils MHC class II as a key driver of spatial tumor ecosystems and clinical outcomes

Fernando Pérez‐Villatoro, Aleksandra Shabanova, Lilian van Wagensveld…·Anniina Färkkilä

Cyclic immunofluorescence of 265 high-grade serous ovarian carcinomas and random-forest feature ranking identify cancer-cell MHC-II as an adjusted predictor of longer survival marking immune-activated tumor-stroma hotspots.

10 citationstop 1%

humanimaging

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BioinformaticsBioinformaticsPeer-reviewedFeb 19, 2025

Tribus: Semi-automated discovery of cell identities and phenotypes from multiplexed imaging and proteomicdata

Ziqi Kang, Angela Szabo, Teodora Farago…·Anniina Färkkilä

Tribus is a semi-automated tool for cell phenotyping from multiplexed imaging and proteomic data, achieving high accuracy and efficiency compared to existing methods.

6 citations

imagingproteomics

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