Author

Logan A. Walsh

Institut du cancer Rosalind & Morris GoodmanORCID 0000-0001-8771-2577Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Physiology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:cell-cell communication· 2 Research Focus:clustering· 1 Approach:experimental assay· 1 Organism:human· 1 Organism:rat· 1 Assay:scRNA-seq· 1 Research Focus:spatial domain detection· 1

Frequent Co-Authors

Albert Santamaria‐MartíneziD· 1 shared Benoit FisetiD· 1 shared C. Thomas AppletoniD· 1 shared Daniele TavernariiD· 1 shared Dariana Ocica· 1 shared Garth BlackleriD· 1 shared Giovanni CirielloiD· 1 shared HanYu Jiang· 1 shared

Activity by Year

2023-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperBioinformatics

Albert Santamaria‐MartínezORCID

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2 papers

Recent·Most cited

PhysiologybioRxivPreprintSep 26, 2024

Metabolic Stress Accelerates Dysregulated Synovial Macrophage-Fibroblast Communication and Htra1 Overproduction in Osteoarthritis

Garth Blackler, Joseph Daniel Klapak, Qinli Guo…·C. Thomas Appleton

This study shows metabolic stress worsens osteoarthritis by altering synovial macrophage-fibroblast communication and increasing Htra1 expression.

1 citation

𝕏 PostBluesky

BioinformaticsNature GeneticsPeer-reviewedDec 8, 2023

CellCharter reveals spatial cell niches associated with tissue remodeling and cell plasticity.

Marco Varrone, Daniele Tavernari, Albert Santamaria‐Martínez…·Giovanni Ciriello

CellCharter identifies and characterizes spatial cellular niches across diverse datasets, revealing tumor-associated neutrophil and cancer cell interactions linked to poor prognosis in lung cancer.

215 citationstop 1%

humanspatial transcriptomics

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