Author

Olga Lyudovyk

Memorial Sloan Kettering Cancer CenterORCID 0000-0001-8793-8920Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Organism:Arabidopsis· 1 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Assay:CITE-seq· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Research Focus:drug response / drug discovery· 1

Frequent Co-Authors

Quaid MorrisiD· 2 shared Alexander Sasse· 1 shared Artem StreltsoviD· 1 shared Benjamin D. GreenbaumiD· 1 shared Cédric NotredameiD· 1 shared Cedrik MagisiD· 1 shared Cyrus L. TamiD· 1 shared Debashish RayiD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersImmunology

Quaid MorrisORCID

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2 papers

Recent·Most cited

ImmunologybioRxivPreprintJul 20, 2026

Ensembles of in silico structures enable T cell peptide-MHC binding prediction

Olga Lyudovyk, JA Levine, Melissa Pathil…·Benjamin D. Greenbaum

The paper introduces enFoldX, a structure-based method for predicting TCR:pMHC binding using AlphaFold3 ensembles, achieving high accuracy for cognate vs. non-cognate classification.

DOI 10.64898/2026.07.14.738340

proteomicsdeep learning

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GenomicsbioRxivPreprintOct 15, 2024

Reconstructing the sequence specificities of RNA-binding proteins across eukaryotes

Alexander Sasse, Debashish Ray, Kaitlin U. Laverty…·Quaid Morris

The paper introduces EuPRI, a resource of RNA motifs for 34,736 RBPs across 690 eukaryotes, expanding motif knowledge and enabling functional and evolutionary insights.

3 citations

humanmouse

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