Sunbeam: an extensible pipeline for analyzing metagenomic sequencing experiments
Erik Clarke, Louis J. Taylor, Chunyu Zhao, Andrew Jesse Connell, Jung‐Jin Lee, Bryton Fett, Frederic D. Bushman, Kyle L. Bittinger
Sunbeam is a modular pipeline for metagenomic analysis that standardizes preprocessing and removes low-complexity reads, enabling reproducible and extensible workflows.
Microbiome · Mar 22, 2019Peer-reviewedBioinformatics