Author

Marc Osterland

Bayer (Germany)ORCID 0000-0001-9133-9322Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:cell type annotation· 2 Assay:imaging· 2 Research Focus:batch correction / integration· 1 Research Focus:benchmarking· 1 Approach:contrastive learning· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Research Focus:differential expression· 1

Frequent Co-Authors

David GnuttiD· 2 shared Paula Andrea Marin ZapataiD· 2 shared Adriana BorowaiD· 1 shared Amanda Lembke· 1 shared Amandine Thibaudeau· 1 shared Amélie Weiss· 1 shared Amy B. GoodaleiD· 1 shared Amy Unruh· 1 shared

Activity by Year

2023-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBioinformatics

David GnuttORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

BioinformaticsScientific ReportsPeer-reviewedFeb 10, 2025

Self-supervision advances morphological profiling by unlocking powerful image representations

Vladislav Kim, Nikolas Adaloglou, Marc Osterland…·Paula Andrea Marin Zapata

This study uses self-supervised learning to improve image representation for Cell Painting, outperforming traditional tools in classification tasks and reducing computational costs.

54 citationstop 1%

imagingdeep learning

𝕏 PostBluesky

BioinformaticsbioRxivPreprintMar 23, 2023

✦ In-depth digest

JUMP Cell Painting chemical dataset: Morphological map of 115,796 compounds in human cells

Srinivas Niranj Chandrasekaran, Jeanelle Ackerman, Eric Alix…·Anne Elizabeth Carpenter

Cell Painting images and profiles for 115,796 compounds in U2OS cells from 12 laboratories; 15.2% of analyzed compounds are phenotypically active, and cross-laboratory replicates cut reference-compound activity by 34%.

98 citations

humanimaging

𝕏 PostBluesky