Author

Asif M. Khan

Bezmiâlem Vakıf ÜniversitesiORCID 0000-0001-9202-279XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:database / resource· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:dimensionality reduction· 1 Approach:experimental assay· 1 Assay:protein sequence· 1 Assay:proteomics· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Li Chuin ChongiD· 2 shared Aakash Kolekar· 1 shared Amitava RoyiD· 1 shared Edwin J. SkidmoreiD· 1 shared Ethan Ward· 1 shared Illyoung ChoiiD· 1 shared Isaac RobinsoniD· 1 shared Mariah L. RayliD· 1 shared

Activity by Year

2022-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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2 shared papersBioinformatics

Li Chuin ChongORCID

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3 papers

Recent·Most cited

BiochemistryNucleic Acids ResearchPeer-reviewedNov 13, 2024

MDRepo - an open environment for data warehousing and knowledge discovery from molecular dynamics simulations

Amitava Roy, Ethan Ward, Illyoung Choi…·Travis J. Wheeler

MDRepo provides an open repository for storing and analyzing molecular dynamics simulations to support drug discovery and structural biology research.

25 citations

experimental assaydatabase / resource

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BioinformaticsbioRxivPreprintOct 31, 2022

Negligible peptidome diversity of SARS-CoV-2 and its higher taxonomic ranks

Li Chuin Chong, Asif M. Khan

The paper uses an alignment-free tool to show that SARS-CoV-2 and its higher taxonomic ranks have minimal peptidome diversity, requiring few sequences to represent viral diversity.

2 citations

virusprotein sequence

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BioinformaticsbioRxivPreprintAug 9, 2022

UNIQmin, an alignment-free tool to study viral sequence diversity across taxonomic lineages: a case study of monkeypox virus

Li Chuin Chong, Asif M. Khan

UNIQmin is an alignment-free tool that compresses viral sequence datasets to study diversity, demonstrated with monkeypox virus data.

1 citation

proteomicsstatistical model

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