Author

Li Chuin Chong

Bezmiâlem Vakıf ÜniversitesiORCID 0000-0002-3574-1365Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:software / tool· 2 Research Focus:variant calling· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Research Focus:dimensionality reduction· 1 Approach:experimental assay· 1

Frequent Co-Authors

Asif M. KhaniD· 2 shared Aron Marchler‐BaueriD· 1 shared Ben BusbyiD· 1 shared Chin‐Hsien TaiiD· 1 shared Chris LauberiD· 1 shared Christopher J. Lanczycki· 1 shared Dachuan ZhangiD· 1 shared David EnomaiD· 1 shared

Activity by Year

2022-2026 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 28 mutual co-author links

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2 shared papersBioinformatics

Asif M. KhanORCID

Author profile →

4 papers

Recent·Most cited

Data-Driven Virus Discovery with Virushunter and Virusgatherer

Liubov Chuprikova, Li Chuin Chong, Sergej Ruff, Stefan Seitz, Chris Lauber

This paper introduces Virushunter and Virusgatherer, tools for discovering viral genomes from sequencing data, and applies them to bat transcriptomes to identify novel virus species.

bioRxiv · Jan 28, 2026 · PreprintBioinformatics

Negligible peptidome diversity of SARS-CoV-2 and its higher taxonomic ranks

Li Chuin Chong, Asif M. Khan

The paper uses an alignment-free tool to show that SARS-CoV-2 and its higher taxonomic ranks have minimal peptidome diversity, requiring few sequences to represent viral diversity.

bioRxiv · Oct 31, 2022 · PreprintBioinformatics

UNIQmin, an alignment-free tool to study viral sequence diversity across taxonomic lineages: a case study of monkeypox virus

Li Chuin Chong, Asif M. Khan

UNIQmin is an alignment-free tool that compresses viral sequence datasets to study diversity, demonstrated with monkeypox virus data.

bioRxiv · Aug 9, 2022 · PreprintBioinformatics

iCn3D: From Web-based 3D Viewer to Structure Analysis Tool in Batch Mode

Jiyao Wang, Philippe Youkharibache, Aron Marchler‐Bauer, Christopher J. Lanczycki, Dachuan Zhang, Shennan Lu, Thomas Madej, Gabriele H. Marchler, Tiejun Cheng, Li Chuin Chong, Sarah Zhao, Kevin Yang, Jack J. Lin, Zhiyu Cheng, Rachel Dunn, , Yuchen Ge

The paper describes the evolution of iCn3D from a web-based 3D viewer to a batch-mode structural analysis tool with Node.js scripts for large-scale structural dataset analysis.

Frontiers in Molecular Biosciences · Feb 17, 2022Peer-reviewedBioinformatics