Author

Jung‐Eun Kim

Genome Research FoundationORCID 0000-0001-9246-0159Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Organism:human· 3 Research Focus:differential expression· 2 Assay:whole-genome sequencing· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Research Focus:genome assembly· 1

Frequent Co-Authors

Jong BhakiD· 2 shared Semin LeeiD· 2 shared Yun Sung ChoiD· 2 shared Alexander F. KoeppeliD· 1 shared Andrea ManicaiD· 1 shared Asta BlažytėiD· 1 shared Byung Chul KimiD· 1 shared Chang-Geun KimiD· 1 shared

Activity by Year

2018-2019 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 23 mutual co-author links

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2 shared papersGenomics

Jong BhakORCID

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3 papers

Recent·Most cited

GenomicsGigaSciencePeer-reviewedDec 1, 2019

Chromosome-scale assembly comparison of the Korean Reference Genome KOREF from PromethION and PacBio with Hi-C mapping information

Hui-Su Kim, Sungwon Jeon, Changjae Kim…·Jong Bhak

This study compares the cost-effectiveness and quality of chromosome-scale genome assemblies using PromethION and PacBio sequencing for the Korean reference genome KOREF, finding PromethION to be more cost-effective with comparable or better quality.

28 citations

humanwhole-genome sequencing

𝕏 PostBluesky

Systems BiologyScientific ReportsPeer-reviewedMar 20, 2019

In situ 10-cell RNA sequencing in tissue and tumor biopsy samples

Shambhavi Singh, Lixin Wang, Dylan L. Schaff…·Kevin A. Janes

This paper introduces 10cRNA-seq, an in situ method for sequencing 10 microdissected cells, showing improved sensitivity and reliability compared to scRNA-seq.

21 citations

mousehuman

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GenomicsScientific ReportsPeer-reviewedMar 29, 2018

KoVariome: Korean National Standard Reference Variome database of whole genomes with comprehensive SNV, indel, CNV, and SV analyses

Jung‐Eun Kim, Jessica A. Weber, Sungwoong Jho…·Jong Bhak

The paper constructs the KoVariome database, a comprehensive resource of genetic variations in Koreans, identifying novel SNVs, indels, CNVs, and SVs and highlighting their implications for disease.

61 citationstop 4%

humanwhole-genome sequencing

𝕏 PostBluesky