Author

Jayme A. Souza‐Neto

Universidade Estadual Paulista (Unesp)ORCID 0000-0001-9281-894XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genetic & Genomic Medicine· 2 Molecular Biology· 2

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:phylogenetics / evolution· 2 Assay:whole-genome sequencing· 2 Approach:experimental assay· 1 Research Focus:variant calling· 1 Organism:virus· 1

Frequent Co-Authors

Patrícia Akemi AssatoiD· 3 shared Antonio Jorge MartinsiD· 2 shared Bibiana SantosiD· 2 shared Cecília Ártico BanhoiD· 2 shared Cláudia Renata dos Santos BarrosiD· 2 shared Débora Botéquio MorettiiD· 2 shared Elaine Cristina MarquezeiD· 2 shared Elaine Vieira SantosiD· 2 shared

Activity by Year

2021-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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Focal author (center)Selected co-authorORCID co-authorUnlinked name

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3 shared papersGenetic & Genomic Medicine

Patrícia Akemi AssatoORCID

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Molecular BiologyPLoS PathogensPeer-reviewedDec 23, 2025

Metabolic reprogramming and gut microbiota ecology drive divergent Plasmodium vivax infection outcomes in Anopheles darlingi

Bianca Cechetto Carlos, Kamila Voges, Pedro Henrique de Andrade Affonso…·George K. Christophides

The paper investigates how metabolic reprogramming and gut microbiota ecology in Anopheles darlingi influence Plasmodium vivax infection outcomes, identifying distinct physiological and microbial responses associated with resistance or susceptibility.

2 citations

statistical model

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Molecular BiologyPathogensPeer-reviewedAug 13, 2025

Targeted Whole Genome Sequencing of African Swine Fever Virus and Classical Swine Fever Virus on the MinION Portable Sequencing Platform

Chester D. McDowell, Taeyong Kwon, Patrícia Akemi Assato…·Jüergen A. Richt

This study develops targeted whole genome sequencing protocols for ASFV and CSFV using MinION sequencing to enable rapid and complete genetic characterization of outbreak strains.

1 citation

whole-genome sequencingexperimental assay

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Genetic & Genomic MedicineNature MicrobiologyPeer-reviewedAug 18, 2022

Genomic epidemiology reveals the impact of national and international restrictions measures on the SARS-CoV-2 epidemic in Brazil

Marta Giovanetti, Svetoslav Nanev Slavov, Vagner Fonseca…·Maria Carolina Elias

The paper uses genomic data to analyze how national and international restrictions affected SARS-CoV-2 transmission in Brazil and Paraguay, showing the spread of variants and the role of importation.

108 citationstop 1%

whole-genome sequencingstatistical model

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Genetic & Genomic MedicinemedRxivPreprintSep 15, 2021

SARS-CoV-2 Delta variant of concern in Brazil - multiple introductions, communitary transmission, and early signs of local evolution

José Salvatore Leister Patané, Vincent Louis Viala, Loyze Paola Oliveira de Lima…·Sandra Coccuzzo

This study characterizes the spread and mutational profile of the SARS-CoV-2 Delta variant in Brazil, focusing on its introduction, transmission, and early signs of local evolution.

12 citations

virusstatistical model

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