Author

Manisha R. Ummadi

Gladstone InstitutesORCID 0000-0001-9575-9025Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell-cell communication· 2 Research Focus:differential expression· 2 Organism:human· 2 Assay:proteomics· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Approach:machine learning (classical)· 1 Assay:metagenomics· 1

Frequent Co-Authors

Danielle L. SwaneyiD· 2 shared Jacqueline M. Fabius· 2 shared Manon EckhardtiD· 2 shared Mehdi BouhaddouiD· 2 shared Nevan J. KroganiD· 2 shared Abdullah M. SyediD· 1 shared Adolfo García‐SastreiD· 1 shared Adrian PeliniD· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 41 mutual co-author links

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2 shared papersCancer Biology

Danielle L. SwaneyORCID

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2 papers

Recent·Most cited

Cancer BiologyiSciencePeer-reviewedJun 1, 2026

Paracrine Signals from HIV-1 Infected Immune Cells Reprogram Cervical Cancer Pathways

Charles Ochieng’ Olwal, Ujjwal Rathore, Sara K. Makanani…·Mehdi Bouhaddou

This study shows HIV-1 infected immune cells alter cervical cancer pathways through paracrine signals, with upregulated PI3K-AKT and interferon-stimulated genes.

3 citations

humanbulk RNA-seq

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Systems BiologybioRxivPreprintOct 19, 2022

Global landscape of the host response to SARS-CoV-2 variants reveals viral evolutionary trajectories

Mehdi Bouhaddou, Ann‐Kathrin Reuschl, Benjamin J. Polacco…·Nevan J. Krogan

The paper systematically analyzes proteomic and genomic data of SARS-CoV-2 variants to identify how mutations affect viral gene expression, host interactions, and immune evasion.

14 citations

humanproteomics

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