Edith M. Ross

CONET infers tumor evolutionary trees and copy number calls from single-cell data using a probabilistic model with MCMC and regularization.

FrenchFISH improves DNA copy number quantification from FISH images by using Poisson models, outperforming manual and automated methods in ovarian cancer tissue sections.

This paper introduces a method for allele-specific copy number segmentation across multiple samples, enabling the identification of shared and private segment boundaries for phylogenetic analysis.