Author

Junichi Ishida

The University of TokyoORCID 0000-0001-9703-9419Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Assay:scRNA-seq· 1 Approach:statistical model· 1

Frequent Co-Authors

Atsumasa KurozumiiD· 1 shared Masamichi ItoiD· 1 shared Norihiko Takeda· 1 shared Ryohei Tanaka· 1 shared Satoshi KoderaiD· 1 shared Shun MinatsukiiD· 1 shared Sosuke Hosokawa· 1 shared Takayuki IsagawaiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

9 top collaborators · 36 mutual co-author links

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1 shared paperBioinformatics

Atsumasa KurozumiORCID

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1 paper

Recent·Most cited

BioinformaticsPLoS ONEPeer-reviewedMar 6, 2026

PAH-former: Transfer Learning for Efficient Discovery of Pulmonary Arterial Hypertension-Associated Genes

Toshinaru Kawakami, Sosuke Hosokawa, Masamichi Ito…·Norihiko Takeda

PAH-former uses transfer learning with Geneformer to identify PAH-associated genes by fine-tuning on public PAH lung tissue data and performing in silico perturbation analysis.

DOI 10.1371/journal.pone.0344084

humanscRNA-seq

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