Author

Abhishek Vijayan

UNSW SydneyORCID 0000-0001-9877-9080Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:benchmarking· 2 Approach:statistical model· 2 Assay:ATAC-seq· 1 Approach:benchmark study· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Fatemeh VafaeeiD· 2 shared Arcot SowmyaiD· 1 shared David Gallego‐OrtegaiD· 1 shared Fabio ZaniniiD· 1 shared Fátima Valdés‐MoraiD· 1 shared Forrest C. KochiD· 1 shared Seid Miad ZandaviiD· 1 shared Shadma FatimaiD· 1 shared

Activity by Year

2022-2022 · peak 2/yr

Co-Author Collaboration Network

8 top collaborators · 18 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBioinformatics

Fatemeh VafaeeORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

BioinformaticsBriefings in BioinformaticsPeer-reviewedAug 9, 2022

Blood-based transcriptomic signature panel identification for cancer diagnosis: Benchmarking of feature extraction methods

Abhishek Vijayan, Shadma Fatima, Arcot Sowmya, Fatemeh Vafaee

This study benchmarks eleven feature extraction methods for identifying blood-based transcriptomic biomarkers in cancer diagnosis, finding PLS-DA superior for classification and Ranger for robust feature selection.

8 citations

bulk RNA-seqstatistical model

𝕏 PostBluesky

BioinformaticsNucleic Acids ResearchPeer-reviewedMay 10, 2022

Disentangling single-cell omics representation with a power spectral density-based feature extraction

Seid Miad Zandavi, Forrest C. Koch, Abhishek Vijayan…·Fatemeh Vafaee

This paper introduces scPSD, a pre-processing method that improves cell subtype separation in single-cell omics data by reducing complexity and enhancing cell-type discrimination.

11 citations

humanscRNA-seq

𝕏 PostBluesky