Kevin J. Liu

This study quantifies how errors in species tree estimation affect cophylogenetic reconstruction accuracy using simulations and genomic data from symbiotic systems.

The paper shows that alignment errors and model misspecification affect phylogenetic estimation when DNA evolution is nonhomogeneous across lineages.

The paper introduces a new non-parametric/semi-parametric sequential resampling method for support estimation in biomolecular sequences, showing comparable or better performance than existing methods.

This study introduces FastNet, a new method for inferring phylogenetic networks from genomic data, showing improved efficiency and accuracy over existing methods.

Coal-Miner improves statistical power and type I error control in GWA studies by accounting for local genealogical variation in sample relatedness.