Alicja Okrasińska

The Impact of Species Tree Estimation Error on Cophylogenetic Reconstruction

This study quantifies how errors in species tree estimation affect cophylogenetic reconstruction accuracy using simulations and genomic data from symbiotic systems.

Insights into optimization of oleaginous fungi - genome-scale metabolic reconstruction and analysis of Umbelopsis sp. WA50703

This paper develops a genome-scale metabolic model for Umbelopsis sp. WA50703 to identify genes and reactions important for polyunsaturated fatty acid production.

Metabolic potential, ecology and presence of endohyphal bacteria is reflected in genomic diversity of Mucoromycotina

The paper reports genomic sequences of six Mucoromycotina fungi and an associated bacterium, linking genomic diversity to metabolic traits and ecological features.