Author

Toshiaki Tameshige

Kihara Institute for Biological ResearchORCID 0000-0001-9959-3800Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:gene regulatory network inference· 2 Organism:plant (other)· 2 Organism:Arabidopsis· 1 Research Focus:benchmarking· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1

Frequent Co-Authors

Kentaro K. ShimizuiD· 2 shared Atsushi J. NaganoiD· 1 shared Jun SeseiD· 1 shared Masaomi HatakeyamaiD· 1 shared Moeko OkadaiD· 1 shared Shotaro TakenakaiD· 1 shared Shuhei NasudaiD· 1 shared Tony Chien-Yen KuoiD· 1 shared

Activity by Year

2018-2025 · peak 1/yr

Co-Author Collaboration Network

9 top collaborators · 21 mutual co-author links

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2 shared papersPlant Biology

Kentaro K. ShimizuORCID

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2 papers

Recent·Most cited

Plant BiologyPlant and Cell PhysiologyPeer-reviewedJan 13, 2025

Modeling of transcriptomic variation among subgenomes in 25 accessions of common wheat reveals cis- and trans-regulation architectures

Yasuyuki Nomura, Moeko Okada, Toshiaki Tameshige…·Atsushi J. Nagano

This study uses Lasy-Seq to analyze transcriptomic variation in 25 common wheat accessions, revealing cis- and trans-regulation patterns across subgenomes and tissues.

5 citations

plant (other)bulk RNA-seq

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BioinformaticsBriefings in BioinformaticsPeer-reviewedNov 26, 2018

Homeolog expression quantification methods for allopolyploids

Tony Chien-Yen Kuo, Masaomi Hatakeyama, Toshiaki Tameshige…·Jun Sese

This study compares RNA-seq expression quantification methods for allopolyploids, finding that subgenome-classification approaches significantly reduce error rates compared to standard methods.

44 citations

Arabidopsisplant (other)

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