Author

Carlos Eduardo Hernandez

Universidad NacionalORCID 0000-0002-0059-8028Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 1 Approach:deep learning· 1 Assay:metagenomics· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Adriana Arciniegas-LealiD· 1 shared Alejandra MencíaiD· 1 shared Chelsea Dvorak SpechtiD· 1 shared Emma M. HerrightyiD· 1 shared Frank Solano-CamposiD· 1 shared Hale TufaniD· 1 shared Jacob B. LandisiD· 1 shared Joyce Estrada-GamboaiD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperMicrobiology

Adriana Arciniegas-LealORCID

Mutual co-authors in cluster

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2 papers

Recent·Most cited

Genomic sampling and population structure of farmer-maintained varieties reveal previously uncharacterized diversity of Theobroma cacao L. in Costa Rica

Emma M. Herrighty, Chelsea Dvorak Specht, Michael A. Gore, Luis Solano, Joyce Estrada-Gamboa, Carlos Eduardo Hernandez, Hale Tufan, Jacob B. Landis

This study analyzes the genetic diversity of farmer-maintained Theobroma cacao in Costa Rica, revealing previously uncharacterized local genetic groups and highlighting the importance of farmer-managed systems for conservation.

Molecular Ecology · Aug 1, 2026Peer-reviewedGenomics

Microbial Diversity and Differentiating Factors of Cocoa Fermentation Systems: Nutritional Supplementation as a Modulation Strategy Assessed by Metabarcoding

Carlos Eduardo Hernandez, Alejandra Mencía, Frank Solano-Campos, Adriana Arciniegas-Leal

This study assesses how amino acid and zinc supplementation affects microbial communities in cocoa fermentation using metabarcoding, showing changes in community composition without reducing diversity.

bioRxiv · Apr 16, 2026 · PreprintMicrobiology