Author

Marco Guarnacci

Australian National UniversityORCID 0000-0002-0117-6898Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 3 Organism:human· 3 Assay:long-read sequencing· 3 Organism:mouse· 3 Research Focus:differential expression· 2 Approach:statistical model· 2 Research Focus:database / resource· 1 Approach:deep learning· 1

Frequent Co-Authors

A.J. SethiiD· 3 shared Eduardo EyrasiD· 3 shared Rippei HayashiiD· 3 shared Thomas PreißiD· 3 shared Agin RavindraniD· 2 shared Akanksha SrivastavaiD· 2 shared Gaétan BurgioiD· 2 shared Madhu Mathi Kanchi· 2 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersBioinformatics

A.J. SethiORCID

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3 papers

Recent·Most cited

BioinformaticsbioRxivPreprintJun 4, 2026

SWARM resolves nanopore signal interference between RNA modification types and reveals splicing-shaped pseudouridylation

Stefan Prodic, Alice Cleynen, Shafi Mahmud…·Eduardo Eyras

SWARM improves detection of RNA modifications by reducing false positives and reveals new splicing-related pseudouridylation patterns.

2 citations

GenomicsbioRxivPreprintApr 27, 2025

Single-molecule multimodal timing of in vivo mRNA synthesis

A.J. Sethi, Marco Guarnacci, Muhammad Bilal…·Rippei Hayashi

This study directly sequences pre-mRNA to resolve transcription and processing at single-molecule resolution, revealing delayed splicing and m6A methylation preceding splicing.

5 citations

BioinformaticsbioRxivPreprintMar 14, 2022

Prediction of m6A and m5C at single-molecule resolution reveals a cooccurrence of RNA modifications across the transcriptome

Pablo Acera Mateos, A.J. Sethi, Agin Ravindran…·Eduardo Eyras

CHEUI predicts m6A and m5C modifications at single-molecule resolution, revealing co-occurrence of these modifications in mRNAs across cell lines and tissues.

19 citations