Author

Qingsong Tang

National Institutes of HealthORCID 0000-0002-0192-1042Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:Hi-C· 3 Assay:ChIP-seq· 2 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Research Focus:software / tool· 2 Approach:statistical model· 2 Research Focus:differential expression· 1

Frequent Co-Authors

Keji ZhaoiD· 4 shared Yaqiang CaoiD· 3 shared Kairong Cui· 2 shared Shuai LiuiD· 2 shared Benjamin C. CarteriD· 1 shared Gang ReniD· 1 shared Gangqing HuiD· 1 shared Jee Youn Kang· 1 shared

Activity by Year

2019-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 22 mutual co-author links

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4 shared papersGenomics

Keji ZhaoORCID

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4 papers

Recent·Most cited

GenomicsbioRxivPreprintJul 13, 2022

Hi-TrAC reveals fractal nesting of super-enhancers

Yaqiang Cao, Shuai Liu, Kairong Cui…·Keji Zhao

Hi-TrAC identifies active sub-TADs with median size 100 kb, revealing fractal nesting of super-enhancers and their disruption by Cohesin and H3K4me1 perturbations.

2 citations

humanmouse

𝕏 PostBluesky

GenomicsbioRxivPreprintJun 1, 2022

Hi-TrAC reveals fine-scale chromatin structures organized by transcription factors

Shuai Liu, Yaqiang Cao, Kairong Cui…·Keji Zhao

Hi-TrAC identifies high-resolution chromatin loops and reveals TFs' roles in organizing long- and short-range chromatin structures.

1 citation

humanHi-C

𝕏 PostBluesky

BioinformaticsNucleic Acids ResearchPeer-reviewedDec 2, 2021

cLoops2: a full-stack comprehensive analytical tool for chromatin interactions

Yaqiang Cao, Shuai Liu, Gang Ren…·Keji Zhao

cLoops2 provides a comprehensive tool for analyzing 3D chromatin interactions, including loop detection and annotation, with open-source code available on GitHub.

41 citations

Hi-Cstatistical model

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GenomicsNature CommunicationsPeer-reviewedAug 20, 2019

Mapping Histone Modifications in Low Cell Number and Single Cells Using Antibody-guided Chromatin Tagmentation (ACT-seq)

Benjamin C. Carter, Wai Lim Ku, Jee Youn Kang…·Keji Zhao

ACT-seq is a new method for mapping histone modifications and chromatin proteins in single cells, using antibody-guided chromatin tagmentation to streamline the process.

148 citationstop 2%

ChIP-seqexperimental assay

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