Author

Michael Syring

Iowa State UniversityORCID 0000-0002-0193-4062Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 2 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 3 Assay:whole-genome sequencing· 3 Approach:experimental assay· 2 Organism:zebrafish· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:clustering· 1

Frequent Co-Authors

Arun Somwarpet SeetharamiD· 3 shared Matthew B. HuffordiD· 3 shared Alyssa R. PhillipsiD· 2 shared Carson M. AndorfiD· 2 shared Edward S. BuckleriD· 2 shared Elizabeth Anne KelloggiD· 2 shared Ethalinda K. S. CannoniD· 2 shared Jeffrey Ross‐IbarraiD· 2 shared

Activity by Year

2021-2025 · peak 1/yr

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10 top collaborators · 45 mutual co-author links

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3 shared papersGenomics

Arun Somwarpet SeetharamORCID

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3 papers

Recent·Most cited

Extensive genome evolution distinguishes maize within a stable tribe of grasses

Michelle C. Stitzer, Arun Somwarpet Seetharam, Armin Scheben, Sheng‐Kai Hsu, Aimee J Schulz, Taylor AuBuchon‐Elder, Mohamed El-Walid, Taylor H. Ferebee, Charles O. Hale, Thuy La, Zong-Yan Liu, Sarah J. McMorrow, Patrick J. Minx, Alyssa R. Phillips, Michael Syring, , Matthew B. Hufford

The paper examines genome evolution in maize and related grasses, revealing variable outcomes of polyploidy across species.

bioRxiv · Jan 22, 2025 · PreprintEvolutionary Biology

Current genomic deep learning architectures generalize across grass species but not alleles

Travis Wrightsman, Taylor H. Ferebee, M. Cinta Romay, Arun Somwarpet Seetharam, Taylor AuBuchon‐Elder, Alyssa R. Phillips, Michael Syring, Matthew B. Hufford, Elizabeth Anne Kellogg, Edward S. Buckler

The paper benchmarks deep learning models on genomic data across 18 grass species, finding they generalize across species but not across alleles within species.

bioRxiv · Apr 11, 2024 · PreprintGenomics

De novo assembly, annotation, and comparative analysis of 26 diverse maize genomes

Matthew B. Hufford, Arun Somwarpet Seetharam, Margaret Roth Woodhouse, Kapeel M. Chougule, Shujun Ou, Jianing Liu, William A. Ricci, Tingting Guo, Andrew J. Olson, Yinjie Qiu, Rafael Della Coletta, Silas B. Tittes, Asher I. Hudson, Alexandre P. Marand, Sharon Wei, , R. Kelly Dawe

A multi-genome analysis of maize reveals previously unknown variation in gene content, genome structure, and methylation.

Science · Aug 5, 2021Peer-reviewedGenomics