Andrew J. Olson

This study uses ESM2 to identify beneficial genetic variants in a Sorghum bicolor diversity panel by analyzing PRC scores and their association with agronomic traits.

The paper develops a pan-gene catalogue for Asian cultivated rice by creating a reference panel of 16 cultivars and identifying core and cultivar-specific genes.

The paper presents 10 new high-quality genome assemblies for sorghum genotypes, identifying structural variants and SNPs linked to bioenergy traits.

A multi-genome analysis of maize reveals previously unknown variation in gene content, genome structure, and methylation.

TRaCE ranks transcripts by election-like voting to select canonical transcripts based on RNA-seq data and other criteria.

This study constructs high-quality sorghum genome assemblies and identifies structural variations and resistance genes associated with sugarcane aphid resistance.

The paper develops a tool for haplotype phasing and expression analysis in maize using single-molecule long-read sequencing, revealing allele-specific and imprinted gene expression.

The paper identifies poorly annotated genes in maize using a double triage approach combining quality metrics and gene tree visualization, revealing 4,000 novel annotations.

NECorr ranks gene importance in biological processes using molecular networks and transcriptome data, identifying known and new regulators in Arabidopsis flower tissue.

The paper improves the maize reference genome using single molecule technologies, resulting in longer contigs and better annotation of repetitive elements and genes.