Author

Shiliang Ji

Nanjing UniversityORCID 0000-0002-0393-1324Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Organism:human· 2 Assay:ChIP-seq· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Approach:graph neural network· 1 Research Focus:protein structure prediction· 1

Frequent Co-Authors

Siyuan TongiD· 1 shared Wen ZhangiD· 1 shared Wen Zhang· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

3 top collaborators · 1 mutual co-author link

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1 shared paperBioinformatics

Siyuan TongORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintAug 20, 2026

A Five-Gene Stromal-EMT Signature Predicts Prognosis, Immunotherapy Resistance, and Therapeutic Vulnerability in Bladder Cancer

Wen Zhang, Shiliang Ji

DOI 10.64898/2026.08.15.745016

humanbulk RNA-seq

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BioinformaticsbioRxivPreprintApr 29, 2026

Multi-Modal Deep Learning Integrates Spatial Topologies and Sequential Motifs to Identify Class I HDAC Inhibitors as Pan-Cancer Therapeutics

Siyuan Tong, Wen Zhang, Shiliang Ji

This paper develops a multi-modal deep learning framework to identify Class I HDAC inhibitors as broad-spectrum anti-cancer agents by integrating chemical and transcriptomic data.

DOI 10.64898/2026.04.22.720196

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