Author

Ipsa Mittra

Broad InstituteORCID 0000-0002-0482-4037Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Organism:human· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Alexander CraneiD· 1 shared Frank P. B. DuboisiD· 1 shared Marcin B. ImielinskiiD· 1 shared Rameen BeroukhimiD· 1 shared Shu ZhangiD· 1 shared Simona DaliniD· 1 shared Siyun LeeiD· 1 shared Sophie WebsteriD· 1 shared

Activity by Year

2023-2023 · peak 1/yr

Co-Author Collaboration Network

9 top collaborators · 36 mutual co-author links

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1 shared paperBioinformatics

Alexander CraneORCID

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1 paper

Recent·Most cited

Comparison of germline and somatic structural variants in cancers reveal systematic differences in variant generating and selection processes

Wolu Chukwu, Siyun Lee, Alexander Crane, Shu Zhang, Sophie Webster, Ipsa Mittra, Marcin B. Imielinski, Rameen Beroukhim, Frank P. B. Dubois, Simona Dalin

The paper compares germline and somatic structural variants in cancer, identifying differences in their generating processes and selection, and develops a classifier to distinguish them in tumor samples without matched normals.

bioRxiv · Oct 9, 2023 · PreprintBioinformatics