Author

Yuxuan Zhou

Zhejiang UniversityORCID 0000-0002-0643-151XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:database / resource· 2 Assay:CITE-seq· 1 Approach:deep learning· 1 Approach:experimental assay· 1 Organism:human· 1

Frequent Co-Authors

Jingcheng WuiD· 3 shared Zhan Mei ZhouiD· 3 shared Shuqing CheniD· 2 shared Ying ChiiD· 2 shared Feng ZhuiD· 1 shared Gang PaniD· 1 shared Jian WuiD· 1 shared M. WeiiD· 1 shared

Activity by Year

2022-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 34 mutual co-author links

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3 shared papersBioinformatics

Jingcheng WuORCID

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3 papers

Recent·Most cited

TRAIT: A Comprehensive Database for T-cell Receptor-Antigen Interactions

M. Wei, Jingcheng Wu, Shuxian Bai, Yuxuan Zhou, Yichang Chen, Xue Zhang, Wenyi Zhao, Ying Chi, Gang Pan, Feng Zhu, Shuqing Chen, Zhan Mei Zhou

TRAIT compiles nearly 8 million experimentally validated TCR-antigen pairs to provide a comprehensive resource for T-cell receptor interactions, aiding immunotherapy and vaccine design.

Genomics Proteomics & Bioinformatics · Apr 21, 2025Peer-reviewedImmunology

DeepCIP: a multimodal deep learning method for the prediction of internal ribosome entry sites of circRNAs

Yuxuan Zhou, Jingcheng Wu, Shihao Yao, Yulian XU, Wenbin Zhao, Yunguang Tong, Zhan Mei Zhou

DeepCIP predicts circRNA IRESs using sequence and structure information, outperforming existing methods and improving predictive performance through feature integration.

Computers in Biology and Medicine · Aug 1, 2023Peer-reviewedBioinformatics

TSNAdb v2.0: the updated version of tumor-specific neoantigen database

Jingcheng Wu, Wenfan Chen, Yuxuan Zhou, Ying Chi, Xian‐Sheng Hua, Jian Wu, Xun Gu, Shuqing Chen, Zhan Mei Zhou

TSNAdb v2.0 updates the tumor-specific neoantigen database with stricter identification criteria, predicted neoantigens from three mutation types, and experimentally validated neoantigens classified by evidence.

Genomics Proteomics & Bioinformatics · Oct 6, 2022Peer-reviewedBioinformatics