Author

Tomoko Nakanishi

Institute for Molecular Medicine FinlandORCID 0000-0002-0751-6734Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Tomoko Nakanishi2 papers · University of Helsinki

Biology Disciplines

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Genetic & Genomic Medicine· 2

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Organism:human· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:gene regulatory network inference· 1 Research Focus:GWAS / association mapping· 1 Assay:proteomics· 1

Frequent Co-Authors

Andrea GannaiD· 2 shared Chiara CaimeiD· 2 shared Daniela FuscoiD· 2 shared Essi ViippolaiD· 2 shared FinnGeniD· 2 shared M. Austin ArgentieriiD· 2 shared Tatiana CajusoiD· 2 shared Zhijian YangiD· 2 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersGenetic & Genomic Medicine

Andrea GannaORCID

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2 papers

Recent·Most cited

Sex-related signatures in the plasma proteome not attributable to XX and XY chromosomes and their impact on health and disease

Essi Viippola, Tuomo Hartonen, Meihui Zhu, Zhijian Yang, Ryuya Edahiro, Tomoko Nakanishi, Ao Lan, Masahiro Kanai, Nhi N.L. Nguyen, Tatiana Cajuso, Daniela Fusco, Chiara Caime, Kristina Zguro, Sebastian May-Wilson, M. Austin Argentieri, , Andrea Ganna

The paper introduces the Proteomic Sex Index (PSI), a continuous measure of plasma proteome alignment with chromosomal sex, showing its association with health and disease traits.

medRxiv · Oct 21, 2026 · PreprintGenetic & Genomic Medicine

Removing genetic effects on plasma proteins enhances their utility as disease biomarkers

Daniela Fusco, Zhijian Yang, Essi Viippola, Tatiana Cajuso, Andrea Corbetta, Chiara Caime, Jakob German, Martina Fu, M. Austin Argentieri, FinnGen, Tomoko Nakanishi, Zhiyu Yang, Andrea Ganna

The paper removes genetic effects from plasma proteins to enhance their utility as disease biomarkers, showing improved associations with diseases and environmental factors.

medRxiv · Oct 14, 2025 · PreprintGenetic & Genomic Medicine