Author

Stephen Henry Friend

Sage BionetworksORCID 0000-0002-0830-7600Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Approach:simulation· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Adam A. Margolin· 1 shared Adam D. EwingiD· 1 shared Anna Y. Lee· 1 shared Cristian Caloian· 1 shared David H. HaussleriD· 1 shared Gustavo A. StolovitzkyiD· 1 shared ICGC-TCGA DREAM Somatic Mutation Calling Challenge Participants· 1 shared J Christopher BareiD· 1 shared

Activity by Year

2018-2018 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperBioinformatics

Adam A. Margolin

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1 paper

Recent·Most cited

Combining accurate tumour genome simulation with crowd-sourcing to benchmark somatic structural variant detection

Anna Y. Lee, Adam D. Ewing, Kyle Ellrott, Yin Hu, Kathleen E. Houlahan, J Christopher Bare, Shadrielle M. G. Espiritu, Vincent Huang, Kristen Dang, Zechen Chong, Cristian Caloian, Takafumi N. Yamaguchi, ICGC-TCGA DREAM Somatic Mutation Calling Challenge Participants, Michael Kellen, Ken Chen, , Paul Christopher Boutros

The paper benchmarks somatic structural variant detection methods using synthetic tumors and crowd-sourced submissions, finding that ensembles do not always outperform individual methods.

Genome biology · Nov 6, 2018Peer-reviewedBioinformatics