Author

Jian Gao

Chinese Academy of SciencesORCID 0000-0002-0994-3430Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Assay:long-read sequencing· 2 Organism:Arabidopsis· 1 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Approach:experimental assay· 1

Frequent Co-Authors

Jiawei WangiD· 2 shared A.J. SethiiD· 1 shared Agin RavindraniD· 1 shared Akanksha SrivastavaiD· 1 shared Alexandra SneddoniD· 1 shared Bradlee D. NelmsiD· 1 shared Daniel Blaine MarchantiD· 1 shared Eduardo EyrasiD· 1 shared

Activity by Year

2022-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

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2 shared papersPlant Biology

Jiawei WangORCID

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3 papers

Recent·Most cited

Plant BiologyNature MethodsPeer-reviewedNov 27, 2025

FX-Cell: a method for single-cell RNA sequencing on difficult-to-digest and cryopreserved plant samples

Xin Ming, Mu-Chun Wan, Z W Zhang…·Jiawei Wang

FX-Cell enables scRNA-seq on difficult-to-digest and cryopreserved plant samples, allowing high-quality cell atlases and acute wounding response analysis.

22 citationstop 2%

plant (other)scRNA-seq

BioinformaticsbioRxivPreprintMar 14, 2022

Prediction of m6A and m5C at single-molecule resolution reveals a cooccurrence of RNA modifications across the transcriptome

Pablo Acera Mateos, A.J. Sethi, Agin Ravindran…·Eduardo Eyras

CHEUI predicts m6A and m5C modifications at single-molecule resolution, revealing co-occurrence of these modifications in mRNAs across cell lines and tissues.

19 citations

humanmouse

BioinformaticsGenome biologyPeer-reviewedJan 17, 2022

DENA: training an authentic neural network model using Nanopore sequencing data of Arabidopsis transcripts for detection and quantification of N6-methyladenosine on RNA

Hang Qin, Liang Shiou Ou, Jian Gao…·Xuan Li

The paper introduces DENA, a neural network model trained on Nanopore sequencing data to detect and quantify N6-methyladenosine (m6A) in RNA, showing high accuracy in Arabidopsis and consistency with human data.

79 citationstop 2%

Arabidopsislong-read sequencing