Author

Ali Dabouei

Carnegie Mellon UniversityORCID 0000-0002-1084-6224Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:imaging· 2 Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Approach:contrastive learning· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Min XuiD· 2 shared Andrew A. BridgesiD· 1 shared Chengzhi CaoiD· 1 shared Ishan Mishra· 1 shared Kuwar Kapur· 1 shared Mostofa Rafid UddiniD· 1 shared Xiangrui ZengiD· 1 shared Yizhe Ding· 1 shared

Activity by Year

2024-2024 · peak 2/yr

Co-Author Collaboration Network

9 top collaborators · 20 mutual co-author links

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2 shared papersBioinformatics

Min XuORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintSep 16, 2024

Deep Video Analysis for Bacteria Genotype Prediction

Ali Dabouei, Ishan Mishra, Kuwar Kapur…·Min Xu

This paper uses video analysis to predict bacterial genotypes from spatiotemporal growth patterns, showing that low-resolution microscopy videos can classify genetic modifications in Vibrio cholerae.

DOI 10.1101/2024.09.16.613253

bacteria (other)imaging

𝕏 PostBluesky

BioinformaticsbioRxivPreprintMar 2, 2024

DUAL: deep unsupervised simultaneous simulation and denoising for cryo-electron tomography

Xiangrui Zeng, Yizhe Ding, Yueqian Zhang…·Min Xu

DUAL improves cryo-electron tomography by simultaneously denoising and simulating data without labeled training data, enhancing structural detection and annotation.

3 citations

imagingdeep learning

𝕏 PostBluesky