Author
Tokai UniversityORCID 0000-0002-1182-9127Unclaimed ORCID profile · follow to get notified of new preprints
6 papers
Recent·Most cited
Hiromi Matsumae, Megumi Sudo, Tadashi Imanishi, Tsuyoshi Hosoya
The paper develops an image analysis system to quantify mycelial growth traits in Schizophyllum commune and identifies strain-specific responses to environmental conditions.
Mahoko Takahashi Ueda, Kirill A. Kryukov, Satomi Mitsuhashi…·So Nakagawa
The paper analyzes 176,401 ERV-ORFs across 19 mammalian genomes to determine their transcriptional potential and evolutionary dynamics.
Kirill A. Kryukov, Mahoko Takahashi Ueda, So Nakagawa, Tadashi Imanishi
The paper benchmarks 44 sequence compressors on FASTA-formatted data, identifying optimal tools based on performance metrics like compression ratio and speed.
Kirill A. Kryukov, Mahoko Takahashi Ueda, So Nakagawa, Tadashi Imanishi
The paper introduces NAF, a lossless reference-free compression format for DNA sequences that offers faster decompression than existing tools while maintaining comparable compression ratios.
Satomi Mitsuhashi, So Nakagawa, Mahoko Takahashi Ueda…·Hiroaki Mitsuhashi
The paper uses nanopore sequencing to accurately sequence the D4Z4 repeat array associated with FSHD, demonstrating high accuracy and potential for molecular diagnosis.
Satomi Mitsuhashi, Kirill A. Kryukov, So Nakagawa…·Tadashi Imanishi
The paper develops a portable system using nanopore sequencer and laptop computers for rapid on-site bacterial composition analysis, showing comparable or better results than conventional methods.