Author

Mara Stadler

Helmholtz MunichORCID 0000-0002-1241-031XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 1 Microbiology· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Assay:ChIP-seq· 1 Organism:E. coli· 1 Approach:experimental assay· 1 Organism:human· 1

Frequent Co-Authors

Christian L. MülleriD· 3 shared Roberto Olayo-AlarcóniD· 2 shared Ana Rita BrochadoiD· 1 shared André MateusiD· 1 shared Christoph Binsfeld· 1 shared Jacob BieniD· 1 shared Lucía Pérez JiméneziD· 1 shared Morgane WarteliD· 1 shared

Activity by Year

2024-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 26 mutual co-author links

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3 shared papersMicrobiology

Christian L. MüllerORCID

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3 papers

Recent·Most cited

Systematic Characterization of Transport Regulation in Escherichia coli across defined environmental cues

Christoph Binsfeld, Roberto Olayo-Alarcón, Lucía Pérez Jiménez, Morgane Wartel, Mara Stadler, André Mateus, Christian L. Müller, Ana Rita Brochado

The paper systematically characterizes transport regulation in E. coli across 94 chemical cues, revealing new transcriptional responses and the role of regulators like Rob.

PLoS Biology · Jul 22, 2025Peer-reviewedMicrobiology

Predictive modeling of microbial data with interaction effects

Mara Stadler, Roberto Olayo-Alarcón, Jacob Bien, Christian L. Müller

The paper introduces interaction models for microbial data to predict community functions and resistance genes, showing improved performance in diverse datasets.

bioRxiv · Apr 29, 2024 · PreprintGenomics

asteRIa enables robust interaction modeling between chromatin modifications and epigenetic readers

Mara Stadler, Saulius Lukauskas, Till Bartke, Christian L. Müller

asteRIa models interactions between chromatin modifications and epigenetic readers, identifying cooperative effects on protein binding.

Nucleic Acids Research · Apr 24, 2024Peer-reviewedMolecular Biology