Author

Jo E. B. Halliday

University of GlasgowORCID 0000-0002-1329-9035Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:clustering· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Blandina Theophil MmbagaiD· 3 shared John A. CrumpiD· 2 shared John R. ClaxtoniD· 2 shared Joram BuzaiD· 2 shared Kathryn J. AllaniD· 2 shared Ryan W. Carter· 2 shared Sarah CleavelandiD· 2 shared William A. de GlanvilleiD· 2 shared

Activity by Year

2020-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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3 shared papersSystems Biology

Blandina Theophil MmbagaORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Prospective cohort study reveals unexpected aetiologies of livestock abortion in northern Tanzania

Kate M. Thomas, Tito Kibona, John R. Claxton, William A. de Glanville, Felix J. Lankester, Nelson B. Amani, Joram Buza, Ryan W. Carter, Gail E. Chapman, John A. Crump, Mark Patrick Dagleish, Jo E. B. Halliday, C.M. Hamilton, Elisabeth A. Innes, Frank Katzer, , Kathryn J. Allan

The paper investigates causes of livestock abortion in Tanzania using a cohort study and serosurveillance, identifying several infectious agents associated with abortions.

Scientific Reports · Jul 8, 2022Peer-reviewedSystems Biology

Target-enrichment sequencing yields valuable genomic data for difficult-to-culture bacteria of public health importance

Tristan P. W. Dennis, Barbara K. Mable, Brian W. Brunelle, Alison M. Devault, Ryan W. Carter, Clare Louise Ling, Blandina Theophil Mmbaga, Jo E. B. Halliday, Katarína Oravcová, Taya Forde

This study evaluates target-enrichment sequencing for generating genomic data from difficult-to-culture bacteria, showing it can produce high-quality data with sufficient coverage for variant calling.

Microbial Genomics · May 27, 2022Peer-reviewedMolecular Biology

Classification and characterisation of livestock production systems in northern Tanzania

William A. de Glanville, Alicia Davis, Kathryn J. Allan, Joram Buza, John R. Claxton, John A. Crump, Jo E. B. Halliday, P. Johnson, Tito J. Kibona, Blandina Theophil Mmbaga, Emmanuel Senyael Swai, Christopher B. Uzzell, Jonathan Yoder, Joanne P. Sharp, Sarah Cleaveland

The paper classifies livestock production systems in northern Tanzania using quantitative methods and finds three distinct clusters corresponding to traditional pastoral, agro-pastoral, and smallholder systems, with notable shifts toward crop agriculture.

PLoS ONE · Dec 30, 2020Peer-reviewedSystems Biology