Author

Yi Qiao

State Key Laboratory of Digital Medical EngineeringORCID 0000-0002-1371-6775Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Yi Qiao7 papers · University of Utah

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Assay:long-read sequencing· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Amy Lovichik· 1 shared Andrew FarrelliD· 1 shared Changwei BiiD· 1 shared Gábor MarthiD· 1 shared Gayatri Deepti Khanderao· 1 shared Jiajian LuoiD· 1 shared Jing TuiD· 1 shared Lija Mammen· 1 shared

Activity by Year

2023-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperGenomics

Amy Lovichik

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2 papers

Recent·Most cited

Single-cell RNA sequencing in Hirschsprungs disease tissues reveals lack of neuronal differentiation in the aganglionic colon segment

Szabolcs Tarapcsák, Xiaomeng Huang, Yi Qiao, Andrew Farrell, Lija Mammen, Amy Lovichik, Gayatri Deepti Khanderao, Teresa S. Musci, Philip J. Moos, Matthew A. Firpo, Michael D. Rollins, Gábor Marth

This study uses scRNA-seq and WGS to analyze HSCR patient tissues, identifying impaired neuronal differentiation in aganglionic colon segments.

bioRxiv · Jul 1, 2025 · PreprintGenomics

3rd-ChimeraMiner: A pipeline for integrated analysis of whole genome amplification generated chimeric sequences using long-read sequencing

Na Lü, Yi Qiao, Pengfei An, Jiajian Luo, Changwei Bi, Musheng Li, Zuhong Lu, Jing Tu

This study introduces 3rd-ChimeraMiner, a pipeline to detect and integrate chimeric sequences from MDA-amplified DNA long-read sequencing data, improving downstream analysis.

Briefings in Bioinformatics · Jul 11, 2023Peer-reviewedBioinformatics