Author
Xiaomeng Huang
University of UtahORCID 0000-0001-9651-7503Unclaimed ORCID profile · follow to get notified of new preprints
Biology Disciplines
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2021-2026 · peak 2/yrCo-Author Collaboration Network
10 top collaborators · 32 mutual co-author links7 papers
Recent·Most cited
- Cancer BiologybioRxivPreprintDOI 10.64898/2026.10.12.758619
- BioinformaticsbioRxivPreprint
DS5: An Open-Source Framework for Standardized High-Throughput Drug Screening Data Storage, Analysis, and Drug Prioritization
Hui Yang, James Lubkowitz, Gabor Marth…·義行 高橋
DS5 is an open-source framework that standardizes HTS data storage, analysis, and drug prioritization, validated against public benchmarks and applied in clinical settings.
DOI 10.64898/2026.09.22.753533 - GenomicsbioRxivPreprint
Single-cell RNA sequencing in Hirschsprungs disease tissues reveals lack of neuronal differentiation in the aganglionic colon segment
Szabolcs Tarapcsák, Xiaomeng Huang, Yi Qiao…·Gábor Marth
This study uses scRNA-seq and WGS to analyze HSCR patient tissues, identifying impaired neuronal differentiation in aganglionic colon segments.
- GenomicsGenome ResearchPeer-reviewed
Long-read single-cell RNA sequencing enables the study of cancer subclone-specific genotype and phenotype in chronic lymphocytic leukemia
Gage S. Black, Xiaomeng Huang, Yi Qiao…·Gábor Marth
This study uses long-read scRNA-seq to analyze cancer subclone-specific mutations and transcriptomic differences in CLL patients with BTKC481S mutations.
- Cancer BiologybioRxivPreprint
A precision oncology-focused deep learning framework for personalized selection of cancer therapy
Casey Sederman, Chieh‐Hsiang Yang, Emilio Cortes-Sanchez…·Gábor Marth
This paper introduces ScreenDL, a deep learning model that predicts effective cancer therapies using tumor omic and drug screening data, outperforming existing methods in preclinical trials.
4 citations - Systems BiologyCell SystemsPeer-reviewed
Cancer Hallmarks Define a Continuum of Plastic Cell States between Small Cell Lung Cancer Archetypes
Sarah M. Groves, Geena V. Ildefonso, Caitlin O. McAtee…·Vito Quaranta
This study shows SCLC cells exist in a continuum of plastic states rather than discrete subtypes, with gene expression patterns linked to cancer hallmarks and potential therapeutic targets.
67 citationstop 3% - BioinformaticsbioRxivPreprint
quickBAM: a parallelized BAM file access API for high throughput sequence analysis informatics
T. Anders Pitman, Xiaomeng Huang, Gábor Marth, Yi Qiao
quickBAM accelerates BAM file access by utilizing parallel storage hardware, significantly reducing analysis time for genomic data processing.
DOI 10.1101/2021.10.05.463280