Author

Pedro M. Pereira

Instituto de Tecnologia Química e Biológica António XavierORCID 0000-0002-1426-9540Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2 Cell Biology· 1

Signature Assays, Organisms & Methods

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Assay:imaging· 2 Research Focus:benchmarking· 1 Research Focus:cell signaling & trafficking· 1 Approach:deep learning· 1 Approach:experimental assay· 1 Assay:fluorescence / live-cell microscopy· 1 Organism:human· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Ricardo HenriquesiD· 3 shared Guillaume JacquemetiD· 2 shared Raquel PortelaiD· 2 shared Ann‐Christin LindåsiD· 1 shared António D. BritoiD· 1 shared Bruno M. SaraivaiD· 1 shared Buzz BaumiD· 1 shared Christophe LeterrieriD· 1 shared

Activity by Year

2019-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 23 mutual co-author links

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3 shared papersBioinformatics

Ricardo HenriquesORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Cell BiologyNature CommunicationsPeer-reviewedDec 13, 2025

PhotoFiTT: A Quantitative Framework for Assessing Phototoxicity in Live-Cell Microscopy Experiments

Mario Del Rosario, Estibaliz Gómez‐de‐Mariscal, Leonor Morgado…·Ricardo Henriques

PhotoFiTT quantifies phototoxicity in live-cell microscopy by analyzing mitotic timing, cell size, and activity, showing near-UV light causes significant mitotic delays at low doses.

10 citations

humanfluorescence / live-cell microscopy

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BioinformaticsNature MethodsPeer-reviewedJan 2, 2025

NanoPyx: super-fast bioimage analysis powered by adaptive machine learning

Bruno M. Saraiva, Inês Cunha, António D. Brito…·Ricardo Henriques

NanoPyx improves bioimage analysis speed using adaptive machine learning to optimize algorithm selection and execution.

12 citationstop 4%

imagingmachine learning (classical)

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BioinformaticsJournal of Physics D Applied PhysicsPeer-reviewedJan 28, 2019

NanoJ: a high-performance open-source super-resolution microscopy toolbox

Romain F. Laine, Kalina L. Tosheva, Nils Gustafsson…·Ricardo Henriques

NanoJ provides a high-performance open-source toolbox for super-resolution microscopy, offering tools for data alignment, image reconstruction, quality assessment, structural modeling, and sample control.

189 citations

imagingexperimental assay

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