Author

Viswateja Nelakuditi

Hospital for Sick ChildrenORCID 0000-0002-1556-3645Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Assay:ATAC-seq· 1 Research Focus:database / resource· 1 Approach:experimental assay· 1 Organism:human· 1 Research Focus:software / tool· 1 Approach:statistical model· 1

Frequent Co-Authors

Michael BrudnoiD· 2 shared Arun K RamaniiD· 1 shared Chris J. CotsapasiD· 1 shared Greg Clark· 1 shared Hillary ElrickiD· 1 shared Justin FoongiD· 1 shared Lauryl M. J. NutteriD· 1 shared Parisa ShooshtariiD· 1 shared

Activity by Year

2018-2020 · peak 1/yr

Co-Author Collaboration Network

9 top collaborators · 20 mutual co-author links

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2 shared papersBioinformatics

Michael BrudnoORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintApr 21, 2020

FORCAST: a fully integrated and open source pipeline to design Cas-mediated mutagenesis experiments

Hillary Elrick, Viswateja Nelakuditi, Greg Clark…·Lauryl M. J. Nutter

FORCAST is a software pipeline that integrates existing tools to design, evaluate, and store Cas-mediated mutagenesis experiments.

1 citation

experimental assaysoftware / tool

𝕏 PostBluesky

GenomicsbioRxivPreprintDec 3, 2018

OCHROdb: a comprehensive, quality checked database of open chromatin regions from sequencing data

Parisa Shooshtari, Samantha Feng, Viswateja Nelakuditi…·Chris J. Cotsapas

The paper creates a quality-checked database of open chromatin regions from 828 DNase-I hypersensitive sequencing samples across 194 human cell types.

5 citations

𝕏 PostBluesky