Author

Joseph W. Foley

Douglas Mental Health University InstituteORCID 0000-0002-1579-5286Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:human· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1 Approach:statistical model· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Robert B. WestiD· 2 shared Shirley ZhuiD· 2 shared Chunfang ZhuiD· 1 shared Michael Joseph MeaneyiD· 1 shared Peipei Lu· 1 shared Philippe JolivetiD· 1 shared

Activity by Year

2019-2023 · peak 1/yr

Co-Author Collaboration Network

6 top collaborators · 15 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersGenomics

Robert B. WestORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Cost-effective DNA methylation profiling by FML-seq

Joseph W. Foley, Shirley Zhu, Robert B. West

FML-seq reduces costs of DNA methylation profiling while maintaining accuracy in measuring absolute and differential cytosine methylation in human cell lines.

Life Science Alliance · Sep 29, 2023Peer-reviewedGenomics

Gene-expression profiling of single cells from archival tissue with laser-capture microdissection and Smart-3SEQ

Joseph W. Foley, Chunfang Zhu, Philippe Jolivet, Shirley Zhu, Peipei Lu, Michael Joseph Meaney, Robert B. West

This paper introduces Smart-3SEQ, a method for accurate gene expression profiling from small RNA samples, including FFPE tissue, and demonstrates its application to identify new macrophage phenotypes in the tumor microenvironment.

Genome Research · Nov 1, 2019Peer-reviewedGenomics