Author

Yuxiang Tan

Boston UniversityORCID 0000-0002-1704-1293Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 3

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:benchmarking· 2 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Assay:metagenomics· 1

Frequent Co-Authors

Chenhao LiiD· 1 shared Han HuiD· 1 shared Hengwen YangiD· 1 shared Junyu CheniD· 1 shared Lei DaiiD· 1 shared Yan KouiD· 1 shared Yan Qin TaniD· 1 shared Yang‐Yu LiuiD· 1 shared

Activity by Year

2020-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperBioinformatics

Chenhao LiORCID

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3 papers

Recent·Most cited

BioinformaticsiMetaPeer-reviewedAug 1, 2022

StrainPanDA: linked reconstruction of strain composition and gene content profiles via pangenome-based decomposition of metagenomic data

Han Hu, Yuxiang Tan, Chenhao Li…·Lei Dai

StrainPanDA links strain composition and gene content in metagenomic data to understand microbial functions and phenotypes.

14 citations

metagenomicsstatistical model

𝕏 PostBluesky

BioinformaticsbioRxivPreprintMar 23, 2020

FPfilter: A false-positive-specific filter for whole-genome sequencing variant calling from GATK

Yuxiang Tan, Yu Zhang, Hengwen Yang, Zhinan Yin

FPfilter improves variant calling by specifically filtering false positives while preserving true positives in whole-genome sequencing data.

4 citations

whole-genome sequencingstatistical model

𝕏 PostBluesky

BioinformaticsbioRxivPreprintMar 15, 2020

QueryFuse Is A Sensitive Algorithm For Detection Of Gene-Specific Fusions

QueryFuse detects gene-specific fusions from RNA-seq data by using a hypothesis-based approach, improving sensitivity and reducing computational time compared to existing tools.

1 citation

humanbulk RNA-seq

𝕏 PostBluesky