Author

Catherine Branger

InsermORCID 0000-0002-1722-0259Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:database / resource· 1 Organism:E. coli· 1 Research Focus:gene regulatory network inference· 1 Research Focus:software / tool· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Claudine MédigueiD· 1 shared David VallenetiD· 1 shared Érick DenamuriD· 1 shared Guilhem RoyeriD· 1 shared Jean‐Winoc DecousseriD· 1 shared Mathieu DuboisiD· 1 shared

Activity by Year

2018-2018 · peak 1/yr

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6 top collaborators · 15 mutual co-author links

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1 shared paperBioinformatics

Claudine MédigueORCID

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1 paper

Recent·Most cited

BioinformaticsMicrobial GenomicsPeer-reviewedSep 1, 2018

PlaScope: a targeted approach to assess the plasmidome of Escherichia coli strains

Guilhem Royer, Jean‐Winoc Decousser, Catherine Branger…·David Vallenet

PlaScope improves plasmid detection in E. coli by combining Centrifuge with a curated database, achieving high recall, specificity, and accuracy compared to existing tools.

58 citations

E. coliwhole-genome sequencing

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