Author

David Maria Hollenstein

Max Perutz LabsORCID 0000-0002-1977-1556Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Biochemistry· 1 Bioinformatics· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Assay:proteomics· 3 Approach:statistical model· 2 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1

Frequent Co-Authors

Viktoria DorferiD· 2 shared Alireza NameniiD· 1 shared An StaesiD· 1 shared Bart Van PuyveldeiD· 1 shared Caroline JachmanniD· 1 shared Caroline LennartssoniD· 1 shared Christian PanseiD· 1 shared Christian SeiseriD· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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2 shared papersBiochemistry

Viktoria DorferORCID

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3 papers

Recent·Most cited

BiochemistrybioRxivPreprintJun 19, 2026

A DIA-based quantitative crosslinking mass spectrometry framework for dynamic structural proteomics

Micha Johannes Birklbauer, Sowmya Sivakumar Geetha, Paul Getreuer…·Fränze Müller

This paper introduces DIA-QCLMS, a framework for quantitative crosslinking mass spectrometry that improves confidence assessment and integrates structural features, showing improved reproducibility in analyzing protein dynamics.

DOI 10.64898/2026.06.16.732730

proteomicsdeep learning

𝕏 PostBluesky

BioinformaticsbioRxivPreprintDec 20, 2025

ProteoBench: the community-curated platform for comparing proteomics data analysis workflows

Robbe Devreese, Caroline Jachmann, Bart Van Puyvelde…·Marie Locard‐Paulet

ProteoBench provides a centralized platform for comparing proteomics data analysis workflows, enabling benchmarking and community collaboration.

6 citations

proteomicsbenchmark study

𝕏 PostBluesky

Molecular BiologyNucleic Acids ResearchPeer-reviewedOct 6, 2023

GSE1 links the HDAC1/CoREST co-repressor complex to DNA damage

Terezia Vcelkova, Wolfgang Reiter, Martha Zylka…·Christian Seiser

This study identifies GSE1 as a component of the HDAC1/CoREST complex involved in DNA damage response, revealing its role in DDR signaling and histone modification regulation.

13 citations

proteomicsstatistical model

𝕏 PostBluesky