Decoding cell identity with multi-scale explainable deep learning
Jun Zhu, Zeyang Zhang, Yujia Xiang, Beini Xie, Xinwen Dong, Linhai Xie, Peijie Zhou, Rongyan Yao, Xiaowen Wang, Yang Li, Fuchu He, Wenwu Zhu, Ziwei Zhang, Cheng Chang
The paper introduces Cell Decoder, a deep learning model that provides multi-scale interpretability for cell type decoding and data integration, showing its effectiveness in human and mouse datasets.
bioRxiv · Feb 5, 2024 · PreprintBioinformatics